Nabo - Cross population cell mapping using single cell RNA-Seq

• Overview
• Installation
  • Requirements
  • Short version
  • Long version
• Examples and Workflows
  • MLL-ENL tutorial workflow
• Frequently asked questions
  • How is Nabo different than other single-cell RNA-Seq batch correction tools like MNNcorrect, Seurat CCA and Scanorama ?
  • How do I choose ‘k’ in for running mapping?
  • How do I get a high-resolution figure in a jupyter notebook environment?
  • Which file formats are supported by Nabo?
  • How many samples can I project on reference graph?
  • Can I perform tSNE using Nabo?
  • Can I perform pseudotime analysis on Nabo?
  • Is there a reason why this package is called Nabo?
• API
  • Dataset
  • Mapping
  • Graph
  • Marker
  • GraphPlot
• Glossary
• Support
• License
• Index